2ZXU Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2ZXU_001 | 1/C/13:22 | tRNA D-loop | homologous HL_1QF6_001 NA | |
| HL_2ZXU_002 | 1/C/31:39 | No text annotation | geometric HL_3FOZ_005 HL_37569.1 | |
| HL_2ZXU_003 | 1/C/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5WWT_002 HL_33597.1 | |
| HL_2ZXU_004 | 1/D/13:22 | tRNA D-loop | homologous HL_3TUP_001 HL_45175.1 | |
| HL_2ZXU_005 | 1/D/31:39 | No text annotation | geometric HL_3FOZ_005 HL_37569.1 | |
| HL_2ZXU_006 | 1/D/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5E6M_003 HL_33597.1 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_2ZXU_001 | 1/C/7:10, 1/C/25:27, 1/C/43:49, 1/C/65:66 | tRNA junction | homologous J4_4YCO_001 J4_36296.3 | |
| J4_2ZXU_003 | 1/D/7:10, 1/D/25:27, 1/D/43:49, 1/D/65:66 | tRNA junction | homologous J4_4YCO_001 J4_36296.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J4_2ZXU_002 | No text annotation |
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