3JB9 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3JB9_001 | 1/C/46:54 | No text annotation | ||
| HL_3JB9_002 | 1/N/4:9 | No text annotation | geometric HL_5U3G_001 NA | |
| HL_3JB9_003 | 1/N/58:64 | GNRA | homologous HL_6ASO_001 HL_34789.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_3JB9_004 | No text annotation | ||
| HL_3JB9_005 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3JB9_001 | 1/C/7:8, 1/C/89:91 | No text annotation | ||
| IL_3JB9_002 | 1/C/13:14, 1/C/78:84 | No text annotation | ||
| IL_3JB9_003 | 1/C/25:32, 1/C/66:67 | No text annotation | ||
| IL_3JB9_004 | 1/C/33:37, 1/C/63:65 | No text annotation | ||
| IL_3JB9_005 | 1/C/44:46, 1/C/54:56 | No text annotation | ||
| IL_3JB9_006 | 1/N/46:47, 1/P/22:25 | Multiple bulged bases | geometric IL_1KXK_003 NA | |
| IL_3JB9_007 | 1/N/52:55, 1/N/69:71 | Isolated non-canonical cWW pair | geometric IL_3TD0_005 NA | |
| IL_3JB9_008 | 1/N/55:56, 1/N/66:69 | No text annotation | geometric IL_4WF9_096 IL_44609.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3JB9_009 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3JB9_002 | 1/N/49:51, 1/N/72:83, 1/P/8:20 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_3JB9_001 | No text annotation |
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