4TS2 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4TS2_008 | 1/X/9:14, 1/Y/85:87 | No text annotation | ||
| IL_4TS2_009 | 1/X/12:14, 1/Y/85:86 | No text annotation | ||
| IL_4TS2_002 | 1/X/14:17, 1/Y/82:85 | Minor groove platform IL_80398.1 | ||
| IL_4TS2_004 | 1/X/20:22, 1/Y/77:79 | Isolated non-canonical cWW pair IL_71625.2 | ||
| IL_4TS2_005 | 1/X/22:28, 1/Y/74:77 | Tandem non-canonical cWW pairs IL_98835.1 | ||
| IL_4TS2_010 | 1/X/22:32, 1/Y/64:77 | G-quadruplex IL_93108.1 | ||
| IL_4TS2_006 | 1/X/28:32, 1/Y/64:74 | Part of G-quadruplex IL_47132.1 | ||
| IL_4TS2_011 | 1/X/35:36, 1/Y/57:59 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4TS2_001 | Stack outside cWW | ||
| IL_4TS2_003 | Isolated cWS basepair | ||
| IL_4TS2_007 | Stack outside cWW |
Valid loops
No loops found
Problematic loops
No problematic loops
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