4YAZ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4YAZ_001 | 1/A/25:30 | GNRA | homologous HL_4YAZ_003 HL_34789.2 | |
| HL_4YAZ_002 | 1/A/56:60 | Mini UNCG | homologous HL_4YAZ_004 HL_90436.2 | |
| HL_4YAZ_003 | 1/R/25:30 | GNRA HL_34789.2 | ||
| HL_4YAZ_004 | 1/R/56:60 | Mini UNCG HL_90436.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4YAZ_001 | 1/A/4:7, 1/A/77:81 | No text annotation | homologous IL_4YAZ_005 IL_26254.1 | |
| IL_4YAZ_002 | 1/A/16:20, 1/A/35:39 | Triple sheared | homologous IL_4YAZ_006 IL_15190.2 | |
| IL_4YAZ_003 | 1/A/47:50, 1/A/68:69 | Multiple bulged bases | homologous IL_4YAZ_007 IL_71421.2 | |
| IL_4YAZ_004 | 1/A/51:52, 1/A/64:67 | Multiple bulged bases | homologous IL_4YAZ_008 IL_71421.2 | |
| IL_4YAZ_005 | 1/R/4:7, 1/R/77:81 | No text annotation IL_26254.1 | ||
| IL_4YAZ_006 | 1/R/16:20, 1/R/35:39 | Triple sheared IL_15190.2 | ||
| IL_4YAZ_007 | 1/R/47:50, 1/R/68:69 | Multiple bulged bases IL_71421.2 | ||
| IL_4YAZ_008 | 1/R/51:52, 1/R/64:67 | Multiple bulged bases IL_71421.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4YAZ_001 | 1/A/8:15, 1/A/40:44, 1/A/72:76 | No text annotation | homologous J3_4YAZ_002 J3_96372.2 | |
| J3_4YAZ_002 | 1/R/8:15, 1/R/40:44, 1/R/72:76 | No text annotation J3_96372.2 |
Problematic loops
No problematic loops
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