5VH8 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5VH8_001 | 1/A/4:6, 1/B/25:27 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_002 | 1/A/7:9, 1/B/22:24 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_003 | 1/A/10:12, 1/B/19:21 | Isolated non-canonical cWW pair | geometric IL_4E48_005 IL_01003.5 | |
| IL_5VH8_004 | 2/A/4:6, 2/B/25:27 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_005 | 2/A/7:9, 2/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_006 | 2/A/10:12, 2/B/19:21 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_007 | 3/A/4:6, 3/B/25:27 | Isolated non-canonical cWW pair | geometric IL_4E48_005 IL_01003.5 | |
| IL_5VH8_008 | 3/A/7:9, 3/B/22:24 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_009 | 3/A/10:12, 3/B/19:21 | Isolated cWH basepair | geometric IL_4E5C_001 IL_10892.3 | |
| IL_5VH8_010 | 4/A/4:6, 4/B/25:27 | Isolated cWH basepair | geometric IL_3R1C_018 IL_10892.3 | |
| IL_5VH8_011 | 4/A/7:9, 4/B/22:24 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_012 | 4/A/10:12, 4/B/19:21 | Isolated non-canonical cWW pair | geometric IL_4E48_005 IL_01003.5 | |
| IL_5VH8_013 | 5/A/4:6, 5/B/25:27 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_014 | 5/A/7:9, 5/B/22:24 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_015 | 5/A/10:12, 5/B/19:21 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_016 | 6/A/4:6, 6/B/25:27 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_017 | 6/A/7:9, 6/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_018 | 6/A/10:12, 6/B/19:21 | Isolated non-canonical cWW pair | geometric IL_6IA2_002 IL_01003.5 | |
| IL_5VH8_019 | 7/A/4:6, 7/B/25:27 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_020 | 7/A/7:9, 7/B/22:24 | Isolated cWH basepair | geometric IL_4KQ0_003 IL_10892.3 | |
| IL_5VH8_021 | 7/A/10:12, 7/B/19:21 | Isolated non-canonical cWW pair | geometric IL_6IA2_002 IL_01003.5 | |
| IL_5VH8_022 | 8/A/4:6, 8/B/25:27 | Isolated non-canonical cWW pair | geometric IL_6IA2_002 IL_01003.5 | |
| IL_5VH8_023 | 8/A/7:9, 8/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_024 | 8/A/10:12, 8/B/19:21 | Isolated non-canonical cWW pair | geometric IL_4E48_005 IL_01003.5 | |
| IL_5VH8_025 | 9/A/4:6, 9/B/25:27 | Isolated non-canonical cWW pair | geometric IL_4E48_005 IL_01003.5 | |
| IL_5VH8_026 | 9/A/7:9, 9/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_027 | 9/A/10:12, 9/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_028 | 10/A/4:6, 10/B/25:27 | Isolated non-canonical cWW pair | geometric IL_2ZKO_001 IL_01003.5 | |
| IL_5VH8_029 | 10/A/7:9, 10/B/22:24 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_030 | 10/A/10:12, 10/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_031 | 11/A/4:6, 11/B/25:27 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_032 | 11/A/7:9, 11/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_033 | 11/A/10:12, 11/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_034 | 12/A/4:6, 12/B/25:27 | Self complementary | geometric IL_364D_004 NA | |
| IL_5VH8_035 | 12/A/7:9, 12/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_036 | 12/A/10:12, 12/B/19:21 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_037 | 13/A/4:6, 13/B/25:27 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_038 | 13/A/7:9, 13/B/22:24 | Isolated non-canonical cWW pair | geometric IL_5MWI_003 IL_01003.5 | |
| IL_5VH8_039 | 13/A/10:12, 13/B/19:21 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_040 | 14/A/4:6, 14/B/25:27 | Isolated cWH basepair | geometric IL_3R1C_018 IL_10892.3 | |
| IL_5VH8_041 | 14/A/7:9, 14/B/22:24 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_042 | 14/A/10:12, 14/B/19:21 | Isolated cWH basepair | geometric IL_3R1C_018 IL_10892.3 | |
| IL_5VH8_043 | 15/A/4:6, 15/B/25:27 | Isolated cWH basepair | geometric IL_3R1C_018 IL_10892.3 | |
| IL_5VH8_044 | 15/A/7:9, 15/B/22:24 | Isolated non-canonical cWW pair | geometric IL_7A0S_030 IL_42997.6 | |
| IL_5VH8_045 | 15/A/10:12, 15/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_046 | 16/A/4:6, 16/B/25:27 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_047 | 16/A/7:9, 16/B/22:24 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_048 | 16/A/10:12, 16/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_049 | 17/A/4:6, 17/B/25:27 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_050 | 17/A/7:9, 17/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_051 | 17/A/10:12, 17/B/19:21 | Isolated non-canonical cWW pair | geometric IL_6IA2_002 IL_01003.5 | |
| IL_5VH8_052 | 18/A/4:6, 18/B/25:27 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_053 | 18/A/7:9, 18/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_054 | 18/A/10:12, 18/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_055 | 19/A/4:6, 19/B/25:27 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_056 | 19/A/7:9, 19/B/22:24 | Isolated non-canonical cWW pair | geometric IL_5J7L_273 NA | |
| IL_5VH8_057 | 19/A/10:12, 19/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_058 | 20/A/4:6, 20/B/25:27 | Isolated non-canonical cWW pair | geometric IL_1Y27_001 IL_01003.5 | |
| IL_5VH8_059 | 20/A/7:9, 20/B/22:24 | No text annotation | geometric IL_3ICQ_003 NA | |
| IL_5VH8_060 | 20/A/10:12, 20/B/19:21 | No text annotation | geometric IL_3ICQ_003 NA |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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