6ID1 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6ID1_001 | 1/B/37:45 | No text annotation | ||
| HL_6ID1_003 | 1/F/64:70 | GNRA | homologous HL_6ASO_001 HL_34789.6 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6ID1_002 | No text annotation | ||
| HL_6ID1_004 | No text annotation | ||
| HL_6ID1_005 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6ID1_001 | 1/B/19:24, 1/B/56:58 | No text annotation | ||
| IL_6ID1_002 | 1/B/24:28, 1/B/54:56 | No text annotation | ||
| IL_6ID1_003 | 1/B/35:37, 1/B/45:47 | No text annotation | ||
| IL_6ID1_004 | 1/F/5:7, 1/F/14:15 | Single bulged C | geometric IL_1S03_006 IL_05642.5 | |
| IL_6ID1_010 | 1/F/33:36, 1/G/10:13 | No text annotation | ||
| IL_6ID1_005 | 1/F/52:53, 1/H/22:25 | Multiple bulged bases | geometric IL_1KXK_003 NA | |
| IL_6ID1_006 | 1/F/58:61, 1/F/75:77 | Isolated non-canonical cWW pair | geometric IL_3TD0_002 NA | |
| IL_6ID1_007 | 1/F/61:62, 1/F/72:75 | Multiple bulged bases | geometric IL_7RQB_098 NA | |
| IL_6ID1_008 | 1/F/88:91, 1/H/7:10 | Tandem non-canonical cWW pairs | geometric IL_1MFQ_004 IL_15225.4 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6ID1_009 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6ID1_001 | 1/F/55:57, 1/F/78:87, 1/H/11:20 | No text annotation |
Problematic loops
No problematic loops
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