6KC7 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6KC7_001 | 1/B/42:47 | GNRA | geometric HL_6N2V_002 HL_34789.1 | |
| HL_6KC7_003 | 1/B/74:79 | GNRA | geometric HL_5F9R_003 HL_34789.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6KC7_002 | GNRA with extra near cWW |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6KC7_001 | 1/B/32:35, 1/B/54:57 | Tandem non-canonical cWW pairs | geometric IL_6JDV_001 IL_71194.1 | |
| IL_6KC7_002 | 1/B/35:38, 1/B/51:54 | Tandem non-canonical cWW pairs | geometric IL_6JDV_002 IL_15225.1 | |
| IL_6KC7_003 | 1/B/69:70, 1/B/83:85 | Single bulged U | geometric IL_6JDV_003 IL_97561.1 | |
| IL_6KC7_004 | 1/B/93:97, 1/B/126:128 | C-loop | geometric IL_6JDV_004 IL_63596.12 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6KC7_005 | No text annotation | ||
| IL_6KC7_006 | No text annotation | ||
| IL_6KC7_007 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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