6LVR Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6LVR_001 | 1/B/13:22 | tRNA D-loop | homologous HL_4V90_032 NA | |
| HL_6LVR_003 | 1/B/53:61 | T-loop with 2 stacked bulged bases | homologous HL_7VNV_003 HL_33597.3 | |
| HL_6LVR_004 | 1/D/13:22 | No text annotation | homologous HL_5J8B_105 NA | |
| HL_6LVR_006 | 1/D/53:61 | T-loop with 2 stacked bulged bases | homologous HL_1SER_002 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6LVR_002 | No text annotation | ||
| HL_6LVR_007 | No text annotation | ||
| HL_6LVR_005 | No text annotation | ||
| HL_6LVR_008 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_6LVR_003 | 1/B/7:10, 1/B/25:27, 1/B/43:49, 1/B/65:66 | tRNA junction | homologous J4_7EQJ_002 J4_95067.1 | |
| J4_6LVR_002 | 1/D/7:10, 1/D/25:27, 1/D/43:49, 1/D/65:66 | tRNA junction | homologous J4_8VU0_001 J4_95067.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J4_6LVR_001 | No text annotation |
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