8K85 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8K85_001 | 1/A/4:10, 1/B/50:53 | Tandem non-canonical cWW pairs IL_96332.5 | ||
| IL_8K85_002 | 1/A/4:14, 1/B/40:53 | G-quadruplex IL_64858.3 | ||
| IL_8K85_003 | 1/A/10:14, 1/B/40:50 | Part of G-quadruplex IL_82426.6 | ||
| IL_8K85_004 | 1/A/15:16, 1/B/36:39 | Stack outside cWW IL_66635.5 | ||
| IL_8K85_005 | 1/A/20:21, 1/B/30:32 | Single bulged U IL_89505.4 | ||
| IL_8K85_006 | 1/A/23:25, 1/B/26:28 | Isolated non-canonical cWW pair IL_87907.2 | ||
| IL_8K85_007 | 1/A/26:28, 1/B/23:25 | Isolated non-canonical cWW pair IL_87907.2 | ||
| IL_8K85_008 | 1/A/30:32, 1/B/20:21 | Single bulged U IL_89505.4 | ||
| IL_8K85_009 | 1/A/36:39, 1/B/15:16 | Stack outside cWW IL_66635.5 | ||
| IL_8K85_010 | 1/A/40:50, 1/B/10:14 | Part of G-quadruplex IL_82426.6 | ||
| IL_8K85_011 | 1/A/40:53, 1/B/4:14 | G-quadruplex IL_64858.3 | ||
| IL_8K85_012 | 1/A/50:53, 1/B/4:10 | Tandem non-canonical cWW pairs IL_96332.5 | ||
| IL_8K85_013 | 1/A/4:10, 1/B/50:53 | Tandem non-canonical cWW pairs | geometric IL_4TS2_005 IL_96332.5 | |
| IL_8K85_014 | 1/A/4:14, 1/B/40:53 | G-quadruplex | geometric IL_4TS2_010 IL_64858.3 | |
| IL_8K85_015 | 1/A/10:14, 1/B/40:50 | Part of G-quadruplex | geometric IL_4TS2_006 IL_82426.6 | |
| IL_8K85_016 | 1/A/15:16, 1/B/36:39 | Stack outside cWW | geometric IL_4KZD_006 IL_66635.5 | |
| IL_8K85_017 | 1/A/20:21, 1/B/30:32 | Single bulged U | geometric IL_1GID_012 NA | |
| IL_8K85_018 | 1/A/23:25, 1/B/26:28 | Isolated non-canonical cWW pair | geometric IL_5UNE_003 IL_87907.2 | |
| IL_8K85_019 | 1/A/26:28, 1/B/23:25 | Isolated non-canonical cWW pair | geometric IL_5UNE_003 IL_87907.2 | |
| IL_8K85_020 | 1/A/30:32, 1/B/20:21 | Single bulged U | geometric IL_5TBW_025 NA | |
| IL_8K85_021 | 1/A/36:39, 1/B/15:16 | Stack outside cWW | geometric IL_7L0Z_004 IL_66635.5 | |
| IL_8K85_022 | 1/A/40:50, 1/B/10:14 | Part of G-quadruplex | geometric IL_4TS2_006 IL_82426.6 | |
| IL_8K85_023 | 1/A/40:53, 1/B/4:14 | G-quadruplex | geometric IL_4TS2_010 IL_64858.3 | |
| IL_8K85_024 | 1/A/50:53, 1/B/4:10 | Tandem non-canonical cWW pairs | geometric IL_4TS2_005 IL_96332.5 | |
| IL_8K85_025 | 1/A/4:10, 1/B/50:53 | Tandem non-canonical cWW pairs | geometric IL_4TS2_005 IL_96332.5 | |
| IL_8K85_026 | 1/A/4:14, 1/B/40:53 | G-quadruplex | geometric IL_4TS2_010 IL_64858.3 | |
| IL_8K85_027 | 1/A/10:14, 1/B/40:50 | Part of G-quadruplex | geometric IL_4TS2_006 IL_82426.6 | |
| IL_8K85_028 | 1/A/15:16, 1/B/36:39 | Stack outside cWW | geometric IL_4KZD_006 IL_66635.5 | |
| IL_8K85_029 | 1/A/20:21, 1/B/30:32 | Single bulged U | geometric IL_1GID_012 NA | |
| IL_8K85_030 | 1/A/23:25, 1/B/26:28 | Isolated non-canonical cWW pair | geometric IL_5UNE_003 IL_87907.2 | |
| IL_8K85_031 | 1/A/26:28, 1/B/23:25 | Isolated non-canonical cWW pair | geometric IL_5UNE_003 IL_87907.2 | |
| IL_8K85_032 | 1/A/30:32, 1/B/20:21 | Single bulged U | geometric IL_5TBW_025 NA | |
| IL_8K85_033 | 1/A/36:39, 1/B/15:16 | Stack outside cWW | geometric IL_7L0Z_004 IL_66635.5 | |
| IL_8K85_034 | 1/A/40:50, 1/B/10:14 | Part of G-quadruplex | geometric IL_4TS2_006 IL_82426.6 | |
| IL_8K85_035 | 1/A/40:53, 1/B/4:14 | G-quadruplex | geometric IL_4TS2_010 IL_64858.3 | |
| IL_8K85_036 | 1/A/50:53, 1/B/4:10 | Tandem non-canonical cWW pairs | geometric IL_4TS2_005 IL_96332.5 | |
| IL_8K85_037 | 1/A/4:10, 1/B/50:53 | Tandem non-canonical cWW pairs | geometric IL_4TS2_005 IL_96332.5 | |
| IL_8K85_038 | 1/A/4:14, 1/B/40:53 | G-quadruplex | geometric IL_4TS2_010 IL_64858.3 | |
| IL_8K85_039 | 1/A/10:14, 1/B/40:50 | Part of G-quadruplex | geometric IL_4TS2_006 IL_82426.6 | |
| IL_8K85_040 | 1/A/15:16, 1/B/36:39 | Stack outside cWW | geometric IL_4KZD_006 IL_66635.5 | |
| IL_8K85_041 | 1/A/20:21, 1/B/30:32 | Single bulged U | geometric IL_1GID_012 NA | |
| IL_8K85_042 | 1/A/23:25, 1/B/26:28 | Isolated non-canonical cWW pair | geometric IL_5UNE_003 IL_87907.2 | |
| IL_8K85_043 | 1/A/26:28, 1/B/23:25 | Isolated non-canonical cWW pair | geometric IL_5UNE_003 IL_87907.2 | |
| IL_8K85_044 | 1/A/30:32, 1/B/20:21 | Single bulged U | geometric IL_5TBW_025 NA | |
| IL_8K85_045 | 1/A/36:39, 1/B/15:16 | Stack outside cWW | geometric IL_7L0Z_004 IL_66635.5 | |
| IL_8K85_046 | 1/A/40:50, 1/B/10:14 | Part of G-quadruplex | geometric IL_4TS2_006 IL_82426.6 | |
| IL_8K85_047 | 1/A/40:53, 1/B/4:14 | G-quadruplex | geometric IL_4TS2_010 IL_64858.3 | |
| IL_8K85_048 | 1/A/50:53, 1/B/4:10 | Tandem non-canonical cWW pairs | geometric IL_4TS2_005 IL_96332.5 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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