8TZZ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8TZZ_002 | 1/B/55:58 | Mini UNCG | geometric HL_2F8K_001 HL_90436.2 | |
| HL_8TZZ_004 | 1/B/87:91 | Other HL | geometric HL_5F9R_004 HL_18141.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8TZZ_001 | No text annotation | ||
| HL_8TZZ_003 | GNRA |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8TZZ_008 | 1/B/25:29, 1/B/40:46 | No text annotation | ||
| IL_8TZZ_002 | 1/B/26:29, 1/B/40:45 | No text annotation | geometric IL_5VW1_001 IL_82683.3 | |
| IL_8TZZ_003 | 1/B/54:55, 1/B/58:60 | Single bulged U | geometric IL_4ZT0_004 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8TZZ_004 | No text annotation | ||
| IL_8TZZ_005 | No text annotation | ||
| IL_8TZZ_006 | No text annotation | ||
| IL_8TZZ_007 | No text annotation | ||
| IL_8TZZ_001 | Isolated non-canonical cWW pair | ||
| IL_8TZZ_009 | No text annotation | ||
| IL_8TZZ_010 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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