8VM9 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8VM9_002 | 1/C/34:38 | Mini UNCG | geometric HL_4V88_192 NA | |
| HL_8VM9_003 | 1/C/57:63 | Fab BL3-6 binding hairpin with tSW | geometric HL_6DB9_001 HL_22584.6 | |
| HL_8VM9_004 | 1/R/15:24 | No text annotation HL_85434.1 | ||
| HL_8VM9_005 | 1/R/34:38 | No text annotation HL_32346.4 | ||
| HL_8VM9_006 | 1/R/57:63 | Fab BL3-6 binding hairpin with tSW HL_22584.6 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8VM9_001 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8VM9_001 | 1/C/43:45, 1/C/75:76 | Single bulged A | geometric IL_5FJC_001 IL_31462.6 | |
| IL_8VM9_002 | 1/C/48:52, 1/C/68:72 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_49751.4 | |
| IL_8VM9_003 | 1/R/43:45, 1/R/75:76 | Single bulged A IL_31462.6 | ||
| IL_8VM9_004 | 1/R/48:52, 1/R/68:72 | Triple non-canonical cWW pairs IL_49751.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_8VM9_001 | 1/C/8:9, 1/C/30:31, 1/C/41:42, 1/C/77:78 | No text annotation | homologous J4_8VM9_002 J4_00691.2 | |
| J4_8VM9_002 | 1/R/8:9, 1/R/30:31, 1/R/41:42, 1/R/77:78 | No text annotation J4_00691.2 |
Problematic loops
No problematic loops
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