1DDY Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1DDY_001 | 1/A/19:26 | No text annotation Not in a motif group | geometric HL_1ET4_001 HL_86769.3 | |
| HL_1DDY_002 | 1/C/219:226 | No text annotation Not in a motif group | geometric HL_1ET4_001 HL_86769.3 | |
| HL_1DDY_003 | 1/E/419:426 | No text annotation Not in a motif group | geometric HL_1ET4_001 HL_86769.3 | |
| HL_1DDY_004 | 1/G/619:626 | No text annotation Not in a motif group | geometric HL_1ET4_001 HL_86769.3 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1DDY_001 | 1/A/11:18, 1/A/28:30 | Vitamin B12 Aptamer Not in a motif group | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1DDY_002 | 1/A/18:19, 1/A/26:28 | Multiple bulged bases Not in a motif group | geometric IL_5WTK_001 IL_16396.2 | |
| IL_1DDY_003 | 1/C/211:218, 1/C/228:230 | Vitamin B12 Aptamer Not in a motif group | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1DDY_004 | 1/C/218:219, 1/C/226:228 | Single bulged U Not in a motif group | geometric IL_1ET4_002 IL_83039.13 | |
| IL_1DDY_005 | 1/E/411:418, 1/E/428:430 | Vitamin B12 Aptamer Not in a motif group | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1DDY_006 | 1/E/418:419, 1/E/426:428 | Single bulged U Not in a motif group | geometric IL_1ET4_002 IL_83039.13 | |
| IL_1DDY_007 | 1/G/611:618, 1/G/628:630 | Vitamin B12 Aptamer Not in a motif group | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1DDY_008 | 1/G/618:619, 1/G/626:628 | Single bulged U Not in a motif group | geometric IL_1ET4_002 IL_83039.13 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Coloring options: