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Motif HL_11871.1 Version HL_11871.1 of this group appears in releases 3.88 to 3.88

#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 31-3
1 HL_8DP3_0028DP30.21232Mini UNCGREnterovirus 5' cloverleaf cis-acting replication elementC39U41G43cWW
2 HL_8KAH_0018KAH0.15921Mini UNCGI tracrRNAC55A57G58cWW
3 HL_6JOO_0026JOO0.24431Mini UNCGBGuide RNAC58C60G61cWW
4 HL_5J7L_2045J7L0.24552Mini UNCGDB 5S rRNAG86C88C90cWW
5 HL_6MSF_0026MSF0.23442Mini UNCGSRNA (10-mer)G6||||P_1C8||||P_1C10||||P_1cWW
6 HL_6MSF_0016MSF0.22162Mini UNCGRRNA (14-mer)G6||||P_1C8||||P_1C10||||P_1cWW
7 HL_2OEU_0012OEU0.18853Mini UNCGAHammerhead RibozymeC15U19G20cWW
8 HL_2F8K_0012F8K0.11611Mini UNCGBRNA (16-mer)U6G8A9cWW
9 HL_5TBW_0405TBW0.09852Mini UNCG1 LSU rRNAC1792U1795G1796cWW
10 HL_2QUS_0022QUS0.10623Mini UNCGAHammerhead ribozyme (type III)C32U36G37cWW
11 HL_2QUW_0022QUW0.16103Mini UNCGBHammerhead ribozyme, cleaved fragmentC32U36G37cWW
12 HL_5DH6_0015DH60.14303Mini UNCGAHammerhead ribozyme (type III)C16U20G21cWW
13 HL_7QR8_0027QR80.08061Mini UNCGA tracrRNAC55A57G58cWW
14 HL_5VW1_0025VW10.07491Mini UNCGC tracrRNAC55A57G58cWW
15 HL_5FQ5_0025FQ50.03741Mini UNCGA tracrRNAC55A57G58cWW
16 HL_7QQX_0027QQX0.00001Mini UNCGA tracrRNAC55A57G58cWW
17 HL_7QR0_0027QR00.02471Mini UNCGA tracrRNAC55A57G58cWW
18 HL_5B2T_0025B2T0.03071Mini UNCGA tracrRNAC55A57G58cWW
19 HL_4ZT0_0054ZT00.06221Mini UNCGD tracrRNAC55A57G58cWW
20 HL_7QQP_0027QQP0.05021Mini UNCGA tracrRNAC55A57G58cWW
21 HL_7Z4D_0027Z4D0.07461Mini UNCGA tracrRNAC55A57G58cWW
22 HL_7ZO1_0027ZO10.05421Mini UNCGA tracrRNAC55A57G58cWW
23 HL_6AEG_0026AEG0.07281Mini UNCGA tracrRNAC55A57G58cWW
24 HL_5J7L_1725J7L0.11411Mini UNCGDA LSU rRNAC1565G1567G1568cWW
25 HL_8VTW_0388VTW0.07851Mini UNCG1A LSU rRNAC1565A1567G1568cWW
26 HL_8KAL_0028KAL0.13081Mini UNCGA tracrRNAC55A57G58cWW
27 HL_7A0S_0397A0S0.14801Mini UNCGX LSU rRNAC1581A1583G1584cWW
28 HL_5F9R_0025F9R0.13371Mini UNCGA tracrRNAC73A75G76cWW
29 HL_4WF9_0374WF90.44901Mini UNCGX LSU rRNAC1612A1614G1615cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAG14
CUGAUG4
GUCAC2
CAAG2
CAUUG1
CUCG1
GUCUC1
UUGA1
CCGUG1
CAGG1
CGAG1
Non-Watson-Crick part of the motif
SequenceCounts
UA14
UGAU4
UCA2
AA2
AUU1
UC1
UCU1
UG1
CGU1
AG1
GA1

Release history

Release3.88
Date2024-09-11
StatusNew id, > 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Mini UNCG (29)
    • Basepair signature
    cWW-F
    Heat map statistics
    Min 0.02 | Avg 0.18 | Max 0.51
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