#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 221-222-215-85-95-125-176-106-136-187-117-157-209-129-1710-1310-1811-1511-2012-1612-1713-1815-20
1 HL_5V3F_0015V3F0.83533 ARNA (31-MER)C4G5A6A7G8G9G10C12G13G14G16G18G19A20G21A22G23G24A25G26A27G28cWWtSHcWHcHWcWHcHWcHWcWHcWHcWHcHWtSHcWHcWHcHW
2 HL_6C63_0016C630.38224 ARNA (36-MER)C6G7A8A9G10G11G13A14G15G16G18G20G21A23G24A25G26G27A28G29A30G31cWWtSHtSHcWHcHWcWHcHWcHWcWHcWHcWHcHWtSHcWHcWHcHW
3 HL_8U5Z_0018U5Z0.00004 AMango II variantC6G7A8A9G10G11G13A14G15G16G18G20G21C22G23A24G25G26A27G29A30G31cWWtSHntSHcWHntWWcHWcWHntWWcHWcHWntWWcWHcWHntWWcWHntWWcHWntWWntSHcWHcWHcHW

3D structures

Complete motif including flanking bases
SequenceCounts
CGAAGGGACGGUGCGGAGAGGAGAG1
CGAAGGAGAGGAGAGGAAGAGGAGAG1
CGAAGGUGAGGAGAGGCGAGGAAGAG1
Non-Watson-Crick part of the motif
SequenceCounts
GAAGGGACGGUGCGGAGAGGAGA1
GAAGGAGAGGAGAGGAAGAGGAGA1
GAAGGUGAGGAGAGGCGAGGAAGA1

Release history

Release3.823.833.843.853.863.87
Date2024-03-272024-04-242024-05-222024-06-192024-07-172024-08-14
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-tSH-F-cHW-cWH-F-F-tSH-cWH-cHW-cWH-cHW-cWH-cWH-cHW-tSH-cHW-cWH-F-cWH
Heat map statistics
Min 0.38 | Avg 0.41 | Max 0.84
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