Motif HL_12984.1 Version HL_12984.1 of this group appears in releases 1.0 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1P6V_002 | 1P6V | 0 | 0 | B | 45-MER | G | 44 | G | 45 | U | 46 | U | 47 | C | 48 | G | 49 | A | 50 | U | 51 | U | 52 | C | 53 | C | 54 | cWW | cWW | ntWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUUCGAUUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUUCGAUUC | 1 |
Release history
| Release | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|---|
| Date | 2013-03-04 | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_12984.1 | Only in the parent motif |
|---|---|---|---|
| HL_20739.1 Compare | HL_1P6V_002 | HL_3U5F_034, HL_2XZM_032 |
Children motifs
| Child motif | Common motif instances | Only in HL_12984.1 | Only in the child motif |
|---|---|---|---|
| HL_46175.2 Compare | HL_1P6V_002 | HL_4BPP_020, HL_4BPP_022, HL_1FJG_017, HL_1FJG_015, HL_4A1C_004, HL_3U5F_023, HL_3U5F_021, HL_2AW7_017, HL_2AW7_015 |
- Annotations
-
- (1)
- Basepair signature
- cWW-L-cWW-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: