Motif HL_21372.1 Version HL_21372.1 of this group appears in releases 3.88 to 3.90
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 3-4 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_1QF6_002 | 1QF6 | 0.0000 | 4 | B | tRNA | A | 31 | U | 32 | G | 35 | U | 36 | U | 39 | cWW | cSH |
2 | HL_1KOG_007 | 1KOG | 0.3911 | 4 | O | Threonyl-tRNA synthetase mRNA | U | 82 | U | 83 | G | 86 | U | 87 | G | 90 | cWW | cSH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
AUUCGUAU | 1 |
UUUCGUGUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UUCGU(AET)A | 1 |
UUCGUGU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-cSH-F-F
- Heat map statistics
- Min 0.39 | Avg 0.20 | Max 0.39
Coloring options: