Motif HL_31581.6 Version HL_31581.6 of this group appears in releases 3.89 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 8-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4PRF_002 | 4PRF | 0.0739 | 1 | B | Hepatitis Delta virus ribozyme | C | 147 | A | 148 | U | 149 | U | 150 | G | 151 | A | 153 | C | 154 | U | 155 | C | 156 | C | 157 | G | 158 | cWW | cSH |
| 2 | HL_4PR6_002 | 4PR6 | 0.0000 | 1 | B | HDV RIBOZYME SELF-CLEAVED | C | 147 | A | 148 | U | 149 | U | 150 | G | 151 | A | 153 | C | 154 | U | 155 | C | 156 | C | 157 | G | 158 | cWW | cSH |
| 3 | HL_6F4G_001 | 6F4G | 0.7143 | 2 | C | U2-SL4 | U | 8 | A | 9 | U | 10 | U | 11 | G | 12 | A | 14 | G | 15 | U | 16 | C | 18 | C | 19 | G | 20 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUUGCACUCCG | 2 |
| UAUUGCAGUACCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUGCACUCC | 2 |
| AUUGCAGUACC | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cHS-F-F-F-cWW-F-F-F
- Heat map statistics
- Min 0.07 | Avg 0.34 | Max 0.74
Coloring options: