#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 31-3
1 HL_5J7L_2045J7L0.92112 DB 5S rRNAG86C88C90cWW
2 HL_5TBW_0045TBW0.62862 1 LSU rRNAC132U134G136cWW
3 HL_6TQA_0036TQA0.44962 GRNA (21-mer)A9A11U13cWW
4 HL_6TQB_0016TQB0.35312 BRNA (19-mer)A10A12U14cWW
5 HL_6AAX_0016AAX0.32473 BRNA (28-mer)U933A936A938cWW
6 HL_1ZBH_0011ZBH0.28633 FRNA (20-mer)U11U14A16cWW
7 HL_4ZLD_0014ZLD0.00002 BRNA (17-mer)C7G9G11cWW
8 HL_4Z31_0014Z310.05242 ERNA (15-mer)C6G8G10cWW
9 HL_4QIL_0024QIL0.07042 CRNA (19-mer)C8G10G12cWW
10 HL_4QI2_0034QI20.10182 GRNA (23-mer)C10G12G14cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUGUG4
AUAUU2
GUCUC1
CUUCG1
UGGAAA1
UUUUCA1
Non-Watson-Crick part of the motif
SequenceCounts
UGU4
UAU2
UCU1
UUC1
GGAA1
UUUC1

Release history

Release3.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW
Heat map statistics
Min 0.05 | Avg 0.41 | Max 0.97
Help

Coloring options:

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