Motif HL_36982.3 Version HL_36982.3 of this group appears in releases 3.32 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_204 | 5J7L | 0.9211 | 2 | Mini UNCG | DB | 5S rRNA | G | 86 | C | 88 | C | 90 | cWW |
| 2 | HL_5TBW_004 | 5TBW | 0.6286 | 2 | 1 | LSU rRNA | C | 132 | U | 134 | G | 136 | cWW | |
| 3 | HL_6TQA_003 | 6TQA | 0.4496 | 2 | Mini UNCG | G | RNA (21-mer) | A | 9 | A | 11 | U | 13 | cWW |
| 4 | HL_6TQB_001 | 6TQB | 0.3531 | 2 | Mini UNCG | B | RNA (19-mer) | A | 10 | A | 12 | U | 14 | cWW |
| 5 | HL_6AAX_001 | 6AAX | 0.3247 | 3 | Mini UNCG | B | RNA (28-mer) | U | 933 | A | 936 | A | 938 | cWW |
| 6 | HL_1ZBH_001 | 1ZBH | 0.2863 | 3 | Mini UNCG | F | RNA (20-mer) | U | 11 | U | 14 | A | 16 | cWW |
| 7 | HL_4ZLD_001 | 4ZLD | 0.0000 | 2 | Mini UNCG | B | RNA (17-mer) | C | 7 | G | 9 | G | 11 | cWW |
| 8 | HL_4Z31_001 | 4Z31 | 0.0524 | 2 | Mini UNCG | E | RNA (15-mer) | C | 6 | G | 8 | G | 10 | cWW |
| 9 | HL_4QIL_002 | 4QIL | 0.0704 | 2 | Mini UNCG | C | RNA (19-mer) | C | 8 | G | 10 | G | 12 | cWW |
| 10 | HL_4QI2_003 | 4QI2 | 0.1018 | 2 | Mini UNCG | G | RNA (23-mer) | C | 10 | G | 12 | G | 14 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGUG | 4 |
| AUAUU | 2 |
| GUCUC | 1 |
| CUUCG | 1 |
| UGGAAA | 1 |
| UUUUCA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGU | 4 |
| UAU | 2 |
| UCU | 1 |
| UUC | 1 |
| GGAA | 1 |
| UUUC | 1 |
Release history
| Release | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Mini UNCG (9)
- (1)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.05 | Avg 0.41 | Max 0.97
Coloring options: