Motif IL_29920.1 Version IL_29920.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-7 | 3-6 | 4-5 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3FS0_001 | 3FS0 | 0 | 0 | UAA/GAN related | A+B | U | 46 | G | 47 | A | 48 | G | 49 | * | C | -1 | G | 1 | G | 2 | A | 3 | A | 4 | cWW | nthH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAG*CGGAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA*GGA | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_29920.1 | Only in the parent motif |
|---|---|---|---|
| IL_90126.1 Compare | IL_3FS0_001 | IL_2ZY6_001, IL_3FTM_002, IL_1FJG_061, IL_3F1H_057, IL_3FTM_001 |
Children motifs
| Child motif | Common motif instances | Only in IL_29920.1 | Only in the child motif |
|---|---|---|---|
| IL_31555.1 Compare | IL_3FS0_001 | IL_3LOA_001, IL_2XZM_041, IL_1GID_010, IL_4A1B_026, IL_2XZM_039, IL_1X8W_002, IL_3BNT_002, IL_4A1B_022, IL_3BNT_005, IL_3FTM_002, IL_3G78_010, IL_3FTM_001, IL_3BNQ_002, IL_4A1B_120, IL_1GID_003, IL_3BNQ_008 |
- Annotations
-
- UAA/GAN related (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
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