#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12break 13 14 15 16 17 18 19 20 21 221-222-212-224-205-196-187-1511-1411-1512-1312-1913-1914-18
1 IL_6SY6_0016SY60.00001Kink-turn relatedDRNA (36-MER)G5A6G7A8A9U10G11U12U13A14G16G17*C26A27G28A29G30A31A32A33A34C35cWWntWWntWWtWHtWHtWHtSSncWWntSHcWWtsScsSncSs
2 IL_6SY4_0016SY40.09351Kink-turn relatedCTetR-binding aptamer K1 (43-MER)G6A7G8A9A10U11G12U13U14A15G17G18*C29A30G31A32G33A34A35A36A37C38cWWtWWtWHtWHtWHtSScWWntSHcWWtSscsScSs

3D structures

Complete motif including flanking bases
SequenceCounts
GAGAAUGUUAUGG*CAGAGAAAAC2
Non-Watson-Crick part of the motif
SequenceCounts
AGAAUGUUAUG*AGAGAAAA2

Release history

Release3.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.89
Date2020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-09
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Kink-turn related (2)
  • Basepair signature
    cWW-tWW-L-tWH-cSS-tSS-tWH-cSS-tWH-R-tSS-R-L-L-cWW-L-cWW
    Heat map statistics
    Min 0.09 | Avg 0.05 | Max 0.09
    Help

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