#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 6 71-31-73-44-6
1 IL_3U5F_0773U5F0.78656618S rRNAG1488U1489C1494*G1513U1514A1515C1518cWWcWWcSs
2 IL_1FJG_0501FJG0.00003180 degree turn (H)A SSU rRNAG1255A1256G1258*C1277U1278A1279C1282cSscWWcWW
3 IL_2AW7_0572AW70.51493A16S ribosomal RNAG1255A1256G1258*C1277G1278G1279C1282cSscWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUCUAAC*GUAAUC1
GAUG*CUAAUC1
GAAG*CGGACC1
Non-Watson-Crick part of the motif
SequenceCounts
UCUAA*UAAU1
AU*UAAU1
AA*GGAC1

Release history

Release1.51.61.71.81.91.101.111.121.13
Date2013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_62499.7Only in the parent motif
IL_62499.6
Compare
IL_2AW7_057, IL_1FJG_050IL_3U5F_077IL_1XJR_004
IL_13434.1
Compare
IL_3U5F_077IL_2AW7_057, IL_1FJG_050

Children motifs

Child motifCommon motif instancesOnly in IL_62499.7Only in the child motif
IL_62499.8
Compare
IL_2AW7_057, IL_1FJG_050IL_3U5F_077IL_1XJR_004
IL_16977.1
Compare
IL_3U5F_077IL_2AW7_057, IL_1FJG_050IL_4BPP_076
Annotations
  • (2)
  • 180 degree turn (H) (1)
  • Basepair signature
    cWW-cSS-L-R-R-cWW
    Heat map statistics
    Min 0.51 | Avg 0.47 | Max 0.83
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