1BVJ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1BVJ_001 | 1/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_002 | 2/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_003 | 3/A/9:16 | No text annotation | geometric HL_4WF9_003 HL_75660.5 | |
| HL_1BVJ_004 | 4/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_005 | 5/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_006 | 6/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_007 | 7/A/9:16 | No text annotation | geometric HL_7RQB_022 NA | |
| HL_1BVJ_008 | 8/A/9:16 | No text annotation | geometric HL_7RQB_022 NA | |
| HL_1BVJ_009 | 9/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_010 | 10/A/9:16 | No text annotation | geometric HL_7RQB_022 NA | |
| HL_1BVJ_011 | 11/A/9:16 | No text annotation | geometric HL_7RQB_022 NA | |
| HL_1BVJ_012 | 12/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_013 | 13/A/9:16 | No text annotation | geometric HL_7RQB_022 NA | |
| HL_1BVJ_014 | 14/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_015 | 15/A/9:16 | No text annotation | geometric HL_7RQB_022 NA | |
| HL_1BVJ_016 | 16/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_017 | 17/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_018 | 18/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 | |
| HL_1BVJ_019 | 19/A/9:16 | GNRA wlth tandem sheared | geometric HL_5J7L_154 HL_81538.2 | |
| HL_1BVJ_020 | 20/A/9:16 | GNRA wlth tandem sheared | geometric HL_5J7L_154 HL_81538.2 | |
| HL_1BVJ_021 | 21/A/9:16 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1BVJ_001 | 1/A/5:7, 1/A/18:19 | No text annotation | ||
| IL_1BVJ_002 | 2/A/5:7, 2/A/18:19 | No text annotation | ||
| IL_1BVJ_003 | 3/A/5:7, 3/A/18:19 | Multiple bulged bases | geometric IL_6JXM_001 IL_84476.1 | |
| IL_1BVJ_004 | 4/A/5:7, 4/A/18:19 | No text annotation | ||
| IL_1BVJ_005 | 5/A/5:7, 5/A/18:19 | No text annotation | ||
| IL_1BVJ_006 | 6/A/5:7, 6/A/18:19 | No text annotation | ||
| IL_1BVJ_007 | 7/A/5:7, 7/A/18:19 | No text annotation | ||
| IL_1BVJ_008 | 8/A/5:7, 8/A/18:19 | No text annotation | ||
| IL_1BVJ_009 | 9/A/5:7, 9/A/18:19 | No text annotation | ||
| IL_1BVJ_010 | 10/A/5:7, 10/A/18:19 | No text annotation | ||
| IL_1BVJ_011 | 11/A/5:7, 11/A/18:19 | No text annotation | ||
| IL_1BVJ_012 | 12/A/5:7, 12/A/18:19 | No text annotation | ||
| IL_1BVJ_013 | 13/A/5:7, 13/A/18:19 | Multiple bulged bases | geometric IL_4V88_392 NA | |
| IL_1BVJ_014 | 14/A/5:7, 14/A/18:19 | No text annotation | ||
| IL_1BVJ_015 | 15/A/5:7, 15/A/18:19 | No text annotation | ||
| IL_1BVJ_016 | 16/A/5:7, 16/A/18:19 | Multiple bulged bases | geometric IL_6JXM_001 IL_84476.1 | |
| IL_1BVJ_017 | 17/A/5:7, 17/A/18:19 | Multiple bulged bases | geometric IL_6JXM_001 IL_84476.1 | |
| IL_1BVJ_018 | 18/A/5:7, 18/A/18:19 | No text annotation | ||
| IL_1BVJ_019 | 19/A/5:7, 19/A/18:19 | No text annotation | ||
| IL_1BVJ_020 | 20/A/5:7, 20/A/18:19 | No text annotation | ||
| IL_1BVJ_021 | 21/A/5:7, 21/A/18:19 | No text annotation |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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