1G70 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1G70_001 | 1/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_002 | 2/A/54:64 | UNCG | geometric HL_3U4M_001 HL_61337.5 | |
| HL_1G70_003 | 3/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_004 | 4/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_005 | 5/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_006 | 6/A/54:64 | UNCG | geometric HL_3U4M_001 HL_61337.5 | |
| HL_1G70_007 | 7/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_008 | 8/A/54:64 | UNCG | geometric HL_6DLR_002 HL_61337.5 | |
| HL_1G70_009 | 9/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_010 | 10/A/54:64 | UNCG | geometric HL_3U4M_001 HL_61337.5 | |
| HL_1G70_011 | 11/A/54:64 | UNCG | geometric HL_3U4M_001 HL_61337.5 | |
| HL_1G70_012 | 12/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_013 | 13/A/54:64 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_1G70_014 | 14/A/54:64 | UNCG | geometric HL_5D5L_003 HL_61337.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1G70_001 | 1/A/46:49, 1/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_002 | 1/A/50:51, 1/A/67:69 | Single bulged A | geometric IL_5TBW_082 NA | |
| IL_1G70_003 | 2/A/46:49, 2/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_004 | 2/A/50:51, 2/A/67:69 | Single bulged A | geometric IL_7A0S_012 IL_14190.3 | |
| IL_1G70_030 | 3/A/46:49, 3/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_006 | 3/A/50:51, 3/A/67:69 | Single bulged A | geometric IL_1U63_004 IL_14190.3 | |
| IL_1G70_007 | 4/A/46:49, 4/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_008 | 4/A/50:51, 4/A/67:69 | Single bulged A | geometric IL_7RQB_069 NA | |
| IL_1G70_031 | 5/A/46:49, 5/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_010 | 5/A/50:51, 5/A/67:69 | Single bulged A | geometric IL_1U63_004 IL_14190.3 | |
| IL_1G70_011 | 6/A/46:49, 6/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_012 | 6/A/50:51, 6/A/67:69 | Single bulged A | geometric IL_3CGR_002 IL_14190.3 | |
| IL_1G70_013 | 7/A/46:49, 7/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_014 | 7/A/50:51, 7/A/67:69 | Single bulged A | geometric IL_1U63_004 IL_14190.3 | |
| IL_1G70_015 | 8/A/46:49, 8/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_016 | 8/A/50:51, 8/A/67:69 | Single bulged A | geometric IL_5TBW_082 NA | |
| IL_1G70_017 | 9/A/46:49, 9/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_018 | 9/A/50:51, 9/A/67:69 | Single bulged A | geometric IL_1U63_004 IL_14190.3 | |
| IL_1G70_020 | 10/A/46:49, 10/A/70:74 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1G70_021 | 10/A/50:51, 10/A/67:69 | Single bulged A | geometric IL_3CGR_002 IL_14190.3 | |
| IL_1G70_022 | 11/A/46:49, 11/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_023 | 11/A/50:51, 11/A/67:69 | Single bulged A | geometric IL_4V9F_025 IL_14190.3 | |
| IL_1G70_032 | 12/A/46:49, 12/A/70:74 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1G70_025 | 12/A/50:51, 12/A/67:69 | No text annotation | ||
| IL_1G70_033 | 13/A/46:49, 13/A/70:74 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1G70_027 | 13/A/50:51, 13/A/67:69 | Single bulged A | geometric IL_7RQB_069 NA | |
| IL_1G70_034 | 14/A/46:49, 14/A/70:74 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1G70_029 | 14/A/50:51, 14/A/67:69 | Single bulged A | geometric IL_3CGR_002 IL_14190.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1G70_005 | No text annotation | ||
| IL_1G70_009 | No text annotation | ||
| IL_1G70_019 | No text annotation | ||
| IL_1G70_024 | No text annotation | ||
| IL_1G70_026 | No text annotation | ||
| IL_1G70_028 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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