1SYZ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1SYZ_001 | 1/A/9:15 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_1SYZ_002 | 2/A/9:15 | No text annotation | geometric HL_361D_002 NA | |
| HL_1SYZ_003 | 3/A/9:15 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_1SYZ_004 | 4/A/9:15 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_1SYZ_005 | 5/A/9:15 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_1SYZ_006 | 6/A/9:15 | No text annotation | geometric HL_5M3H_001 NA | |
| HL_1SYZ_007 | 7/A/9:15 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_1SYZ_008 | 8/A/9:15 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1SYZ_009 | 9/A/9:15 | No text annotation | geometric HL_8VTW_008 NA | |
| HL_1SYZ_010 | 10/A/9:15 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_1SYZ_011 | 11/A/9:15 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1SYZ_012 | 12/A/9:15 | No text annotation | ||
| HL_1SYZ_013 | 13/A/9:15 | No text annotation | geometric HL_361D_002 NA | |
| HL_1SYZ_014 | 14/A/9:15 | No text annotation | geometric HL_2Y8W_001 HL_40612.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1SYZ_001 | 1/A/5:7, 1/A/17:20 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 IL_01003.5 | |
| IL_1SYZ_002 | 2/A/5:7, 2/A/17:20 | Isolated non-canonical cWW pair | geometric IL_4V9K_064 IL_01003.5 | |
| IL_1SYZ_003 | 3/A/5:7, 3/A/17:20 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 IL_01003.5 | |
| IL_1SYZ_004 | 4/A/5:7, 4/A/17:20 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 IL_01003.5 | |
| IL_1SYZ_005 | 5/A/5:7, 5/A/17:20 | Isolated cWH basepair | geometric IL_5F5F_001 IL_10892.3 | |
| IL_1SYZ_006 | 6/A/5:7, 6/A/17:20 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 IL_01003.5 | |
| IL_1SYZ_007 | 7/A/5:7, 7/A/17:20 | Isolated non-canonical cWW pair | geometric IL_7A0S_026 IL_01003.5 | |
| IL_1SYZ_008 | 8/A/5:7, 8/A/17:20 | Isolated non-canonical cWW pair | geometric IL_4V9K_064 IL_01003.5 | |
| IL_1SYZ_009 | 9/A/5:7, 9/A/17:20 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 IL_01003.5 | |
| IL_1SYZ_010 | 10/A/5:7, 10/A/17:20 | Isolated non-canonical cWW pair | geometric IL_5J7L_050 NA | |
| IL_1SYZ_011 | 11/A/5:7, 11/A/17:20 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 IL_01003.5 | |
| IL_1SYZ_012 | 12/A/5:7, 12/A/17:20 | Isolated non-canonical cWW pair | geometric IL_4LFB_047 IL_68118.5 | |
| IL_1SYZ_013 | 13/A/5:7, 13/A/17:20 | Isolated non-canonical cWW pair | geometric IL_4V9K_064 IL_01003.5 | |
| IL_1SYZ_014 | 14/A/5:7, 14/A/17:20 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 IL_01003.5 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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