1I9F Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1I9F_001 | 1/A/14:19 | No text annotation | ||
| HL_1I9F_002 | 2/A/14:19 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_1I9F_003 | 3/A/14:19 | No text annotation | ||
| HL_1I9F_008 | 4/A/14:19 | No text annotation | ||
| HL_1I9F_005 | 5/A/14:19 | No text annotation | ||
| HL_1I9F_006 | 6/A/14:19 | No text annotation | geometric HL_8C3A_039 NA | |
| HL_1I9F_007 | 7/A/14:19 | No text annotation | geometric HL_3IGI_004 HL_37569.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1I9F_004 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1I9F_002 | 1/A/6:9, 1/A/25:29 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1I9F_003 | 1/A/10:11, 1/A/22:24 | Single bulged A | geometric IL_1U9S_001 IL_14190.2 | |
| IL_1I9F_004 | 2/A/6:9, 2/A/25:29 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1I9F_005 | 2/A/10:11, 2/A/22:24 | Single bulged A | geometric IL_7RQB_101 NA | |
| IL_1I9F_006 | 3/A/6:9, 3/A/25:29 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1I9F_007 | 3/A/10:11, 3/A/22:24 | Single bulged A | geometric IL_7RQB_101 NA | |
| IL_1I9F_008 | 4/A/6:9, 4/A/25:29 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1I9F_009 | 4/A/10:11, 4/A/22:24 | Single bulged A | geometric IL_2VPL_002 IL_14190.2 | |
| IL_1I9F_010 | 5/A/6:9, 5/A/25:29 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 | |
| IL_1I9F_011 | 5/A/10:11, 5/A/22:24 | No text annotation | ||
| IL_1I9F_012 | 6/A/6:9, 6/A/25:29 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1I9F_013 | 6/A/10:11, 6/A/22:24 | Single bulged A | geometric IL_7RQB_101 NA | |
| IL_1I9F_014 | 7/A/6:9, 7/A/25:29 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_1I9F_015 | 7/A/10:11, 7/A/22:24 | Single bulged A | geometric IL_1U9S_001 IL_14190.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1I9F_001 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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