3DS7 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3DS7_001 | 1/A/31:39 | No text annotation | geometric HL_4FEN_001 HL_59138.2 | |
| HL_3DS7_002 | 1/A/46:53 | No text annotation | geometric HL_4KR9_003 HL_16651.1 | |
| HL_3DS7_003 | 1/A/59:67 | No text annotation | geometric HL_4FEN_003 HL_09122.2 | |
| HL_3DS7_004 | 1/B/231:239 | No text annotation | geometric HL_4FEN_001 HL_59138.2 | |
| HL_3DS7_005 | 1/B/246:253 | No text annotation | ||
| HL_3DS7_006 | 1/B/259:267 | No text annotation | geometric HL_4FEN_003 HL_09122.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3DS7_001 | 1/A/25:27, 1/A/43:45 | Isolated non-canonical cWW pair | geometric IL_6IA2_002 IL_01003.4 | |
| IL_3DS7_002 | 1/B/225:227, 1/B/243:245 | Isolated non-canonical cWW pair | geometric IL_4WF9_042 IL_01003.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3DS7_001 | 1/A/21:25, 1/A/45:54, 1/A/72:75 | No text annotation | geometric J3_4LX6_001 J3_44163.4 | |
| J3_3DS7_002 | 1/B/221:225, 1/B/245:254, 1/B/272:275 | No text annotation | ||
| J4_3DS7_001 | 1/A/21:25, 1/A/45:46, 1/A/53:54, 1/A/72:75 | Purine riboswitch junction | homologous J4_1Y27_001 J4_07491.4 | |
| J4_3DS7_002 | 1/B/221:225, 1/B/245:246, 1/B/253:254, 1/B/272:275 | Purine riboswitch junction | homologous J4_3IVN_001 J4_07491.4 |
Problematic loops
No problematic loops
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