3UD4 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3UD4_001 | 1/R/31:36 | GNRA | geometric HL_3MXH_001 HL_34789.5 | |
| HL_3UD4_002 | 1/R/65:75 | No text annotation | geometric HL_8C3A_006 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3UD4_005 | 1/R/11:13, 1/R/94:98 | Minor groove platform with extra cWW | geometric IL_3MXH_001 IL_82096.1 | |
| IL_3UD4_001 | 1/R/22:26, 1/R/41:45 | Triple sheared | geometric IL_3MXH_002 IL_15190.3 | |
| IL_3UD4_002 | 1/R/52:54, 1/R/86:87 | Major groove intercalation | geometric IL_3MXH_003 IL_97561.6 | |
| IL_3UD4_003 | 1/R/56:57, 1/R/81:84 | Major groove intercalation | geometric IL_3MXH_004 IL_71421.4 | |
| IL_3UD4_004 | 1/R/60:64, 1/R/76:78 | No text annotation | geometric IL_2OEU_001 IL_24466.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3UD4_001 | 1/R/14:21, 1/R/46:50, 1/R/89:93 | No text annotation | geometric J3_3MXH_001 J3_96372.2 |
Problematic loops
No problematic loops
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