4QK9 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4QK9_001 | 1/A/14:19 | GNRA variation | ||
| HL_4QK9_002 | 1/A/56:61 | GNRA | ||
| HL_4QK9_003 | 1/A/72:83 | No text annotation |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4QK9_001 | 1/A/29:34, 1/A/98:103 | No text annotation | geometric IL_4W90_002 IL_74322.1 | |
| IL_4QK9_003 | 1/A/43:44, 1/A/93:96 | Major groove platform; stack outside cWW |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4QK9_002 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4QK9_002 | 1/A/6:10, 1/A/23:24, 1/A/108:110 | No text annotation | geometric J3_4W90_002 J3_55094.1 | |
| J3_4QK9_001 | 1/A/47:52, 1/A/65:68, 1/A/87:90 | C-di-AMP riboswitch |
Problematic loops
No problematic loops
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