5F9R Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5F9R_002 | 1/A/73:76 | Mini UNCG HL_90436.1 | ||
| HL_5F9R_003 | 1/A/90:95 | GNRA HL_34789.1 | ||
| HL_5F9R_004 | 1/A/105:109 | Other HL HL_18141.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5F9R_001 | GNRA |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5F9R_001 | 1/A/26:29, 1/A/58:63 | No text annotation IL_82683.3 | ||
| IL_5F9R_003 | 1/A/72:73, 1/A/76:78 | Single bulged U IL_97561.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_5F9R_006 | No text annotation | ||
| IL_5F9R_007 | No text annotation | ||
| IL_5F9R_008 | No text annotation | ||
| IL_5F9R_009 | No text annotation | ||
| IL_5F9R_010 | No text annotation | ||
| IL_5F9R_002 | No text annotation | ||
| IL_5F9R_004 | Isolated non-canonical cWW pair | ||
| IL_5F9R_005 | No text annotation | ||
| IL_5F9R_011 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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