6EZ0 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6EZ0_021 | 1/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_022 | 2/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_023 | 3/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_024 | 4/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_025 | 5/A/11:16 | No text annotation | geometric HL_5J7L_025 NA | |
| HL_6EZ0_026 | 6/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_027 | 7/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_028 | 8/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_029 | 9/A/11:16 | No text annotation | geometric HL_5J7L_025 NA | |
| HL_6EZ0_030 | 10/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_031 | 11/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_032 | 12/A/11:16 | No text annotation | geometric HL_5J7L_025 NA | |
| HL_6EZ0_033 | 13/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_034 | 14/A/11:16 | No text annotation | geometric HL_5J7L_025 NA | |
| HL_6EZ0_035 | 15/A/11:16 | No text annotation | geometric HL_5J7L_025 NA | |
| HL_6EZ0_036 | 16/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_037 | 17/A/11:16 | No text annotation | geometric HL_5J7L_025 NA | |
| HL_6EZ0_038 | 18/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_039 | 19/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_6EZ0_040 | 20/A/11:16 | No text annotation | geometric HL_8HNT_002 HL_56676.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6EZ0_001 | No text annotation | ||
| HL_6EZ0_002 | No text annotation | ||
| HL_6EZ0_003 | No text annotation | ||
| HL_6EZ0_004 | No text annotation | ||
| HL_6EZ0_005 | No text annotation | ||
| HL_6EZ0_006 | No text annotation | ||
| HL_6EZ0_007 | No text annotation | ||
| HL_6EZ0_008 | No text annotation | ||
| HL_6EZ0_009 | No text annotation | ||
| HL_6EZ0_010 | No text annotation | ||
| HL_6EZ0_011 | No text annotation | ||
| HL_6EZ0_012 | No text annotation | ||
| HL_6EZ0_013 | No text annotation | ||
| HL_6EZ0_014 | No text annotation | ||
| HL_6EZ0_015 | No text annotation | ||
| HL_6EZ0_016 | No text annotation | ||
| HL_6EZ0_017 | No text annotation | ||
| HL_6EZ0_018 | No text annotation | ||
| HL_6EZ0_019 | No text annotation | ||
| HL_6EZ0_020 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6EZ0_041 | 1/A/7:8, 1/A/19:21 | No text annotation | geometric IL_8C3A_038 NA | |
| IL_6EZ0_042 | 2/A/6:8, 2/A/19:22 | No text annotation | geometric IL_9M86_006 IL_32983.2 | |
| IL_6EZ0_043 | 3/A/6:8, 3/A/19:22 | No text annotation | geometric IL_8P9A_292 IL_15698.6 | |
| IL_6EZ0_044 | 4/A/6:8, 4/A/19:22 | No text annotation | geometric IL_4N0T_004 IL_32983.2 | |
| IL_6EZ0_061 | 5/A/7:8, 5/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_062 | 6/A/7:8, 6/A/19:21 | Single stack bend | geometric IL_8CRE_038 NA | |
| IL_6EZ0_047 | 7/A/7:8, 7/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_063 | 8/A/7:8, 8/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_049 | 9/A/7:8, 9/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_050 | 10/A/7:8, 10/A/19:21 | No text annotation | geometric IL_8C3A_038 NA | |
| IL_6EZ0_051 | 11/A/7:8, 11/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_052 | 12/A/6:8, 12/A/19:22 | No text annotation | geometric IL_4N0T_004 IL_32983.2 | |
| IL_6EZ0_064 | 13/A/7:8, 13/A/19:21 | Single stack bend | geometric IL_8CRE_038 NA | |
| IL_6EZ0_065 | 14/A/7:8, 14/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_055 | 15/A/7:8, 15/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_056 | 16/A/6:8, 16/A/19:22 | No text annotation | geometric IL_4N0T_004 IL_32983.2 | |
| IL_6EZ0_057 | 17/A/6:8, 17/A/19:22 | No text annotation | geometric IL_4N0T_004 IL_32983.2 | |
| IL_6EZ0_066 | 18/A/7:8, 18/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_059 | 19/A/7:8, 19/A/19:21 | Single stack bend | geometric IL_7KGA_003 IL_15011.4 | |
| IL_6EZ0_060 | 20/A/7:8, 20/A/19:21 | Single stack bend | geometric IL_5TBW_375 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6EZ0_001 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_002 | No text annotation | ||
| IL_6EZ0_003 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_004 | No text annotation | ||
| IL_6EZ0_005 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_006 | No text annotation | ||
| IL_6EZ0_007 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_008 | No text annotation | ||
| IL_6EZ0_009 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_045 | No text annotation | ||
| IL_6EZ0_010 | No text annotation | ||
| IL_6EZ0_011 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_046 | No text annotation | ||
| IL_6EZ0_012 | No text annotation | ||
| IL_6EZ0_013 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_014 | No text annotation | ||
| IL_6EZ0_015 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_048 | No text annotation | ||
| IL_6EZ0_016 | No text annotation | ||
| IL_6EZ0_017 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_018 | No text annotation | ||
| IL_6EZ0_019 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_020 | No text annotation | ||
| IL_6EZ0_021 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_022 | No text annotation | ||
| IL_6EZ0_023 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_024 | No text annotation | ||
| IL_6EZ0_025 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_053 | No text annotation | ||
| IL_6EZ0_026 | No text annotation | ||
| IL_6EZ0_027 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_054 | No text annotation | ||
| IL_6EZ0_028 | No text annotation | ||
| IL_6EZ0_029 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_030 | No text annotation | ||
| IL_6EZ0_031 | Isolated cWH basepair | ||
| IL_6EZ0_032 | No text annotation | ||
| IL_6EZ0_033 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_034 | No text annotation | ||
| IL_6EZ0_035 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_058 | No text annotation | ||
| IL_6EZ0_036 | No text annotation | ||
| IL_6EZ0_037 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_038 | No text annotation | ||
| IL_6EZ0_039 | Isolated non-canonical cWW pair | ||
| IL_6EZ0_040 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Coloring options: