6JE4 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6JE4_001 | 1/B/42:47 | GNRA | geometric HL_4V9F_023 HL_34789.1 | |
| HL_6JE4_002 | 1/B/74:79 | GNRA | geometric HL_5J7L_152 NA | |
| HL_6JE4_004 | 1/F/42:47 | GNRA | geometric HL_4V9F_040 HL_34789.1 | |
| HL_6JE4_005 | 1/F/74:79 | GNRA | geometric HL_6DVK_001 NA | |
| HL_6JE4_007 | 1/L/42:47 | GNRA | geometric HL_4V9F_040 HL_34789.1 | |
| HL_6JE4_008 | 1/L/74:79 | GNRA | geometric HL_6JDV_001 HL_34789.1 | |
| HL_6JE4_010 | 1/P/42:47 | GNRA | geometric HL_6JDV_002 HL_34789.1 | |
| HL_6JE4_011 | 1/P/74:79 | GNRA | geometric HL_6DVK_001 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6JE4_003 | No text annotation | ||
| HL_6JE4_006 | No text annotation | ||
| HL_6JE4_009 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6JE4_001 | 1/B/32:35, 1/B/54:57 | Tandem non-canonical cWW pairs | geometric IL_6JDV_001 IL_71194.1 | |
| IL_6JE4_002 | 1/B/35:38, 1/B/51:54 | Tandem non-canonical cWW pairs | geometric IL_6JDV_002 IL_15225.1 | |
| IL_6JE4_003 | 1/B/69:70, 1/B/83:85 | Single bulged U | geometric IL_6JDV_003 IL_97561.1 | |
| IL_6JE4_004 | 1/B/93:97, 1/B/126:128 | C-loop | geometric IL_7RQB_104 NA | |
| IL_6JE4_005 | 1/F/32:35, 1/F/54:57 | Tandem non-canonical cWW pairs | geometric IL_6JDV_001 IL_71194.1 | |
| IL_6JE4_006 | 1/F/35:38, 1/F/51:54 | Tandem non-canonical cWW pairs | geometric IL_6JDV_002 IL_15225.1 | |
| IL_6JE4_007 | 1/F/69:70, 1/F/83:85 | Single bulged U | geometric IL_6JDV_003 IL_97561.1 | |
| IL_6JE4_008 | 1/F/93:97, 1/F/126:128 | C-loop | geometric IL_7RQB_104 NA | |
| IL_6JE4_009 | 1/L/32:35, 1/L/54:57 | Tandem non-canonical cWW pairs | geometric IL_6JDV_001 IL_71194.1 | |
| IL_6JE4_010 | 1/L/35:38, 1/L/51:54 | Tandem non-canonical cWW pairs | geometric IL_6JDV_002 IL_15225.1 | |
| IL_6JE4_011 | 1/L/69:70, 1/L/83:85 | Single bulged U | geometric IL_6JDV_003 IL_97561.1 | |
| IL_6JE4_012 | 1/L/93:97, 1/L/126:128 | C-loop | geometric IL_6JDV_004 IL_63596.12 | |
| IL_6JE4_013 | 1/P/32:35, 1/P/54:57 | Tandem non-canonical cWW pairs | geometric IL_6JDV_001 IL_71194.1 | |
| IL_6JE4_014 | 1/P/35:38, 1/P/51:54 | Tandem non-canonical cWW pairs | geometric IL_6JDV_002 IL_15225.1 | |
| IL_6JE4_015 | 1/P/69:70, 1/P/83:85 | Single bulged U | geometric IL_6JDV_003 IL_97561.1 | |
| IL_6JE4_016 | 1/P/93:97, 1/P/126:128 | C-loop | geometric IL_7RQB_104 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6JE4_017 | No text annotation | ||
| IL_6JE4_018 | No text annotation | ||
| IL_6JE4_019 | No text annotation | ||
| IL_6JE4_020 | No text annotation | ||
| IL_6JE4_021 | No text annotation | ||
| IL_6JE4_022 | No text annotation | ||
| IL_6JE4_023 | No text annotation | ||
| IL_6JE4_024 | No text annotation | ||
| IL_6JE4_025 | No text annotation | ||
| IL_6JE4_026 | No text annotation | ||
| IL_6JE4_027 | No text annotation | ||
| IL_6JE4_028 | No text annotation | ||
| IL_6JE4_029 | No text annotation | ||
| IL_6JE4_030 | No text annotation | ||
| IL_6JE4_031 | No text annotation | ||
| IL_6JE4_032 | No text annotation | ||
| IL_6JE4_033 | No text annotation | ||
| IL_6JE4_034 | No text annotation | ||
| IL_6JE4_035 | No text annotation | ||
| IL_6JE4_036 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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