6N5T Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6N5T_001 | 1/A/13:22 | No text annotation | geometric HL_5J7L_015 NA | |
| HL_6N5T_002 | 1/A/57:63 | No text annotation | homologous HL_6N5P_002 HL_64374.2 | |
| HL_6N5T_003 | 1/A/75:83 | Pseudoknot geometry | homologous HL_6N5P_003 HL_52651.3 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6N5T_001 | 1/A/30:35, 1/A/98:103 | No text annotation | geometric IL_6N5P_001 IL_74322.2 | |
| IL_6N5T_002 | 1/A/35:43, 1/A/96:98 | Reverse kink-turn related | homologous IL_6N5P_002 IL_38969.1 | |
| IL_6N5T_004 | 1/A/35:44, 1/A/93:98 | No text annotation | homologous IL_6N5P_004 IL_73700.1 | |
| IL_6N5T_003 | 1/A/43:44, 1/A/93:96 | Major groove platform; stack outside cWW | geometric IL_6N5P_003 IL_74641.3 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6N5T_001 | 1/A/7:12, 1/A/23:26, 1/A/107:110 | No text annotation | homologous J3_6N5P_001 J3_15893.3 | |
| J3_6N5T_002 | 1/A/47:52, 1/A/68:71, 1/A/87:90 | No text annotation | homologous J3_6N5P_002 J3_15893.3 |
Problematic loops
No problematic loops
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