Motif HL_16991.1 Version HL_16991.1 of this group appears in releases 3.77 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-5 | 4-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8EYU_001 | 8EYU | 0.0000 | 4 | G-quadruplex fragment | A | RNA (49-MER) | U | 26 | G | 27 | G | 29 | G | 30 | G | 32 | G | 33 | G | 35 | A | 37 | cWW | cWH | cWH | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUGGAGGAGUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUGGAGGAGU | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- G-quadruplex fragment (1)
- Basepair signature
- cWW-cWH-cWH-F-cWH-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: