Motif HL_45785.1 Version HL_45785.1 of this group appears in releases 3.77 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 4-6 | 7-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8FZA_001 | 8FZA | 0.0000 | 1 | A | PreQ1 Riboswitch (30-MER) | G | 5 | U | 6 | U | 7 | C | 8 | C | 9 | C | 10 | U | 11 | A | 13 | C | 14 | C | 15 | cWW | cSH | ntSW |
| 2 | HL_8FZA_002 | 8FZA | 0.6804 | 1 | B | PreQ1 Riboswitch (30-MER) | G | 5 | U | 6 | U | 7 | C | 8 | C | 9 | C | 10 | U | 11 | A | 13 | C | 14 | C | 15 | cWW | cSH | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUCCCUCACC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCCCUCAC | 2 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-cSH-F-F
- Heat map statistics
- Min 0.68 | Avg 0.34 | Max 0.68
Coloring options: