Motif HL_47732.1 Version HL_47732.1 of this group appears in releases 3.89 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4Z7K_001 | 4Z7K | 0.0000 | 4 | C | RNA/DNA Hybrid (31-MER) | C | 17 | A | 18 | A | 19 | A | 21 | C | 25 | A | 26 | A | 27 | G | 28 | cWW |
| 2 | HL_4Z7L_003 | 4Z7L | 0.2295 | 4 | I | RNA (14-mer) | C | 17 | A | 18 | A | 19 | A | 21 | C | 25 | A | 26 | A | 27 | G | 28 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAAAUAACAAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAAAUAACAA | 2 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.23 | Avg 0.11 | Max 0.23
Coloring options: