#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 81-82-7
1 HL_6CZR_0776CZR0.407211a SSU rRNAG255G256U257A258A259U260G261C263cWW
2 HL_4LFB_0064LFB0.36161A SSU rRNAG259G260U261A262A263U264G265C267cWW
3 HL_5J7L_0065J7L0.40781AA SSU rRNAG259G260U261A262A263C264G265C267cWW
4 HL_8C3A_1998C3A0.39011CM SSU rRNAG328A329U330A331G332U333G334C336cWW
5 HL_4V88_1934V880.36501A6 SSU rRNAG330A331U332A333G334U335G336C338cWW
6 HL_4R4V_0034R4V0.25131AVS ribozyme RNAG689U690U691G692A693C694A696C697cWW
7 HL_2FMT_0052FMT0.18661DFORMYL-METHIONYL-TRNAFMET2G31OMC32U33C34A35U36A38C39cWWncWW
8 HL_5L4O_0025L4O0.00001A tRNAG31OMC32U33C34A35U36A38C39cWWcWW
9 HL_1U9S_0031U9S0.32671ARIBONUCLEASE PG181G182U183A184A185G186A187C189cWW
10 HL_3CUL_0033CUL0.28991CRNA (92-MER)G69U70U71C72G73A74U76C77cWWcwW
11 HL_6PRV_0016PRV0.34973A LSU rRNAC1064U1065U1066A1067G1068A1069A1073G1074cWW
12 HL_1MMS_0011MMS0.34693C23S RIBOSOMAL RNAC1064U1065U1066A1067G1068A1069A1073G1074cWW
13 HL_5D8H_0015D8H0.32363A LSU rRNAC1174U1175U1176A1177G1178A1179A1183G1184cWW
14 HL_5J7L_1615J7L0.34773DA LSU rRNAC1064U1065U1066A1067G1068A1069A1073G1074cWW
15 HL_8C3A_0278C3A0.309431 LSU rRNAC1235A1236U1237G1238G1239A1240C1244G1245cWWcWWa

3D structures

Complete motif including flanking bases
SequenceCounts
CUUAGAAGCAG4
GGUAAUGGC2
GAUAGUGGC2
GUCAUAAC2
GGUAACGGC1
GUUGACUAC1
GGUAAGAGC1
GUUCGAAUC1
CAUGGAAGUCG1
Non-Watson-Crick part of the motif
SequenceCounts
UUAGAAGCA4
GUAAUGG2
AUAGUGG2
(OMC)UCAUAA2
GUAACGG1
UUGACUA1
GUAAGAG1
UUCGAAU1
AUGGAAGUC1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (15)
  • Basepair signature
    cWW-F-F-F-F-F-F
    Heat map statistics
    Min 0.07 | Avg 0.38 | Max 0.70
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