Motif HL_73255.1 Version HL_73255.1 of this group appears in releases 3.77 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1E8O_002 | 1E8O | 0.0000 | 4 | E | 7SL RNA | C | 131 | A | 132 | G | 133 | C | 134 | U | 135 | G | 140 | cWW |
| 2 | HL_5AOX_002 | 5AOX | 0.8005 | 4 | C | ALU JO CONSENSUS RNA | C | 32 | A | 33 | G | 34 | C | 35 | C | 37 | G | 41 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCUACUCG | 1 |
| CAGCACUUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCUACUC | 1 |
| AGCACUUU | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.80 | Avg 0.40 | Max 0.80
Coloring options: