Motif HL_73255.1 Version HL_73255.1 of this group appears in releases 3.77 to 3.87
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 5-6 | 5-7 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_5AOX_002 | 5AOX | 0.7935 | 2 | C | ALU JO CONSENSUS RNA | C | 32 | A | 33 | G | 34 | C | 35 | C | 37 | U | 38 | U | 40 | G | 41 | cWW | ncSH | ||
2 | HL_1E8O_002 | 1E8O | 0.0000 | 2 | E | 7SL RNA | C | 131 | A | 132 | G | 133 | C | 134 | U | 135 | A | 136 | C | 137 | G | 140 | cWW | ncSH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAGCACUUUG | 1 |
CAGCUACUCG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGCACUUU | 1 |
AGCUACUC | 1 |
Release history
Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.79 | Avg 0.40 | Max 0.79
Coloring options: