#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 41-42-3
1 HL_3AM1_0023AM10.37802GNRA variationBC32U33G36G37cWW
2 HL_1L9A_0011L9A0.36332GNRA variationBG146G147G150C151cWW
3 HL_1JID_0011JID0.33822GNRA variationBG146G147G150C151cWW
4 HL_1MFQ_0011MFQ0.36192GNRA variationAG146G147G150C151cWW
5 HL_1G1X_0031G1X0.24542GNRAEC726G727G730G731cWW
6 HL_6SVS_0016SVS0.22842GNRAAC26G27A30G31cWW
7 HL_1G1X_0051G1X0.22952GNRAJC726G727G730G731cWW
8 HL_6CZR_0876CZR0.23492GNRA1aC710G711G714G715cWW
9 HL_4LFB_0164LFB0.22782GNRAAC726G727G730G731cWW
10 HL_5J7L_0165J7L0.22202GNRAAAC726G727G730G731cWW
11 HL_4V88_2074V880.21892GNRAA6C937G938A941G942cWW
12 HL_4OQU_0044OQU0.19972GNRAAC76G77A80G81cWW
13 HL_6M0X_0016M0X0.18202GNRABC32G33A36G37cWW
14 HL_6CZR_0906CZR0.26122GNRA1aC840U841C844G845cWWntSH
15 HL_6UFG_0056UFG0.28992GNRAAC144G145A148G149cWW
16 HL_5U3G_0015U3G0.16432BC18G19A22G23cWW
17 HL_4C7O_0014C7O0.15852GNRAEC19G20A23G24cWW
18 HL_5J7L_1905J7L0.00002GNRADAU2356G2357G2360G2361cWW
19 HL_5J7L_1645J7L0.27932GNRADAU1222G1223A1226G1227cWW
20 HL_7A0S_0317A0S0.40002GNRAXC1235G1236A1239G1240cWW
21 HL_4WF9_0314WF90.33272GNRAXC1260G1261A1264G1265cWW
22 HL_3KTW_0013KTW0.44202GNRACU163G164G167G168cWW
23 HL_3NDB_0013NDB0.53982MU162G163G166G167cWW
24 HL_7A0S_0347A0S0.38562GNRA variationXC1376G1377C1380G1381cWW
25 HL_4V88_2224V880.31842GNRA variationA6G1778U1779A1782C1783cWW
26 HL_7RQB_0357RQB0.26722GNRA1AC1363G1364A1367G1368cWW
27 HL_5J7L_1675J7L0.29412GNRADAC1363G1364A1367G1368cWW
28 HL_4WF9_0344WF90.37922GNRAXC1400G1401A1404G1405cWW
29 HL_5HR6_0025HR60.23085CC31C32C36G39cWWntSW
30 HL_5HR7_0055HR70.17675DC31C32C36G39cWWntSW
31 HL_6DLR_0016DLR0.82152UNCG variationAC27U28G31G32cWWtSW
32 HL_7D81_0017D810.64462AC26G27A30G31cWW
33 HL_6LAX_0026LAX0.24552GNRAAU42G43A46A47cWWntsS
34 HL_4V88_2004V880.50872GNRA variationA6C569A570C573G574cWW
35 HL_4KJI_0014KJI0.53304CG5A6A10C12cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGAAAG8
CGAAGG5
GGGAGC3
CUUCGG2
CGGAAG2
CCUUUCACG2
CGAGAG1
CUAACG1
UGACGG1
UGUGAG1
CGUAAG1
UGGAGG1
UGUAGG1
CGAACG1
GUGAAC1
CGACAG1
UGAAAA1
CAGCCG1
GAAGGAUC1
Non-Watson-Crick part of the motif
SequenceCounts
GAAA9
GAAG5
GGAG4
UUCG2
GGAA2
CUUUCAC2
GAGA1
UAAC1
GACG1
GUGA1
GUAA1
GUAG1
GAAC1
UGAA1
GACA1
AGCC1
AAGGAU1

Release history

Release3.773.783.79
Date2023-12-062024-01-032024-01-03
StatusNew id, > 2 parentsExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • GNRA (21)
  • GNRA variation (7)
  • (6)
  • UNCG variation (1)
  • Basepair signature
    cWW-F-F
    Heat map statistics
    Min 0.07 | Avg 0.37 | Max 0.98
    Help

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