#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 4 5 61-62-42-53-45-6
1 IL_1S72_0601S720.00000Isolated tWW turn (H)0 LSU rRNAU1741A1742*G1743C2036C2037A2038cWWtWWcWW
2 IL_2ZJR_0612ZJR0.16810Isolated tWW turn (H)X LSU rRNAU1680A1681*A1682U1978C1979A1980cWWtWWcWW
3 IL_1NTB_0031NTB0.93520A+BRNA (22-mer) + RNA (18-mer)U16C18*U17G110G111C15cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAG*CCA1
UAA*UCA1
GG*CUUC1
Non-Watson-Crick part of the motif
SequenceCounts
A*C2
*UU1

Release history

Release0.3
Date2011-12-08
StatusUpdated, 2 parents

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in IL_53918.2Only in the child motif
IL_53918.3
Compare
IL_1S72_060, IL_2ZJR_061IL_1NTB_003IL_1U9S_005
IL_73059.1
Compare
IL_1NTB_003IL_1S72_060, IL_2ZJR_061IL_2ZJR_081, IL_1S72_078
Annotations
  • Isolated tWW turn (H) (2)
  • (1)
  • Basepair signature
    Heat map statistics
    Min 0.17 | Avg 0.44 | Max 0.94
    Help

    Coloring options:

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