3DIL | Motifs

Loop id	Location	Annotation; motif group
HL_3DIL_005	1/A/38:55	No text annotation HL_10456.1
HL_3DIL_001	1/A/41:54	No text annotation HL_20751.2
HL_3DIL_002	1/A/93:101	Pseudoknot geometry HL_93324.4
HL_3DIL_003	1/A/124:130	GNRA HL_30068.2
HL_3DIL_004	1/A/149:154	No text annotation HL_78347.4

Loop id	Location	Annotation; motif group
IL_3DIL_001	1/A/12:14, 1/A/78:79	Single bulged C IL_61258.15
IL_3DIL_002	1/A/19:22, 1/A/70:73	Double sheared IL_09705.15
IL_3DIL_003	1/A/22:30, 1/A/63:70	9x8 Sarcin-Ricin with GA cWW pair; G-bulge IL_34470.3
IL_3DIL_004	1/A/38:41, 1/A/54:55	Major groove platform; stack outside cWW IL_50694.7
IL_3DIL_005	1/A/84:85, 1/A/109:111	Single bulged G IL_00225.13
IL_3DIL_006	1/A/115:117, 1/A/137:139	Isolated non-canonical cWW pair IL_87907.2

3D	Loop id	Location	Annotation; motif group	Mapped info
	J5_3DIL_001	1/A/9:12, 1/A/79:82, 1/A/113:114, 1/A/140:142, 1/A/161:166	No text annotation J5_94937.1

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Coloring options: Nucleotide numbers

3DIL Hairpin, Internal, and multi-helix Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops