4UYK Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4UYK_001 | 1/R/21:31 | No text annotation HL_14063.1 | ||
| HL_4UYK_002 | 1/R/43:58 | No text annotation HL_92488.1 | ||
| HL_4UYK_003 | 1/R/98:103 | No text annotation HL_51020.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4UYK_001 | 1/R/77:78, 1/R/122:124 | Minor groove platform IL_34520.1 | ||
| IL_4UYK_005 | 1/R/77:80, 1/R/121:124 | Double sheared IL_58355.1 | ||
| IL_4UYK_003 | 1/R/81:84, 1/R/117:120 | Tandem non-canonical cWW pairs IL_71194.1 | ||
| IL_4UYK_004 | 1/R/86:90, 1/R/111:115 | Triple sheared IL_70744.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4UYK_002 | Not an internal loop |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4UYK_001 | 1/R/10:13, 1/R/65:69, 1/R/132:135 | No text annotation J3_36499.1 | ||
| J3_4UYK_002 | 1/R/16:17, 1/R/35:40, 1/R/61:62 | No text annotation J3_11375.3 |
Problematic loops
No problematic loops
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