4V42 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4V42_001 | 1/AB/13:22 | tRNA D-loop | geometric HL_2CSX_001 HL_37101.1 | |
| HL_4V42_010 | 1/AB/31:39 | tRNA anticodon loop | geometric HL_1FIR_005 NA | |
| HL_4V42_003 | 1/AB/53:61 | No text annotation | geometric HL_1WZ2_007 HL_75660.6 | |
| HL_4V42_004 | 1/AC/13:22 | tRNA D-loop | geometric HL_2CSX_001 HL_37101.1 | |
| HL_4V42_011 | 1/AC/31:39 | tRNA anticodon loop | geometric HL_7VNV_002 HL_81376.1 | |
| HL_4V42_006 | 1/AC/53:61 | No text annotation | geometric HL_1WZ2_007 HL_75660.6 | |
| HL_4V42_007 | 1/AD/12:23 | No text annotation | geometric HL_361D_002 NA | |
| HL_4V42_008 | 1/AD/31:39 | tRNA anticodon loop | geometric HL_3RG5_006 HL_45359.1 | |
| HL_4V42_009 | 1/AD/53:61 | No text annotation | geometric HL_5NFV_001 HL_69752.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V42_002 | No text annotation | ||
| HL_4V42_005 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_4V42_001 | 1/AB/7:10, 1/AB/25:27, 1/AB/43:49, 1/AB/65:66 | tRNA junction | homologous J4_5AXM_001 J4_58311.1 | |
| J4_4V42_002 | 1/AC/7:10, 1/AC/25:27, 1/AC/43:49, 1/AC/65:66 | tRNA junction | homologous J4_8VU0_001 J4_58311.1 | |
| J4_4V42_003 | 1/AD/7:10, 1/AD/25:27, 1/AD/43:49, 1/AD/65:66 | No text annotation |
Problematic loops
No problematic loops
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