5WT1 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5WT1_001 | 1/C/13:22 | tRNA D-loop HL_09260.2 | ||
| HL_5WT1_002 | 1/C/31:39 | No text annotation HL_18565.1 | ||
| HL_5WT1_003 | 1/C/53:61 | T-loop with 2 stacked bulged bases HL_28252.7 | ||
| HL_5WT1_004 | 1/F/13:22 | tRNA D-loop | homologous HL_5WT1_001 HL_09260.2 | |
| HL_5WT1_005 | 1/F/31:39 | No text annotation | homologous HL_5WT1_002 HL_18565.1 | |
| HL_5WT1_006 | 1/F/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5WT1_003 HL_28252.7 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5WT1_001 | 1/C/26:27, 1/C/43:45 | Stack outside cWW IL_66635.5 | ||
| IL_5WT1_002 | 1/F/26:27, 1/F/43:45 | Stack outside cWW | homologous IL_5WT1_001 IL_66635.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_5WT1_001 | 1/C/7:10, 1/C/25:26, 1/C/45:49, 1/C/65:66 | No text annotation J4_72305.5 | ||
| J4_5WT1_002 | 1/C/7:10, 1/C/25:27, 1/C/43:49, 1/C/65:66 | No text annotation J4_22413.3 | ||
| J4_5WT1_003 | 1/F/7:10, 1/F/25:26, 1/F/45:49, 1/F/65:66 | No text annotation | homologous J4_5WT1_001 J4_72305.5 | |
| J4_5WT1_004 | 1/F/7:10, 1/F/25:27, 1/F/43:49, 1/F/65:66 | No text annotation | homologous J4_5WT1_002 J4_22413.3 |
Problematic loops
No problematic loops
Coloring options: