6XMF Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6XMF_001 | 1/C/43:48 | No text annotation | geometric HL_4WF9_003 HL_75660.9 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6XMF_001 | 1/C/9:11, 1/C/74:75 | Single bulged A | geometric IL_5J7L_344 NA | |
| IL_6XMF_002 | 1/C/13:22, 1/C/71:72 | Major groove intercalation | geometric IL_5J7L_315 NA | |
| IL_6XMF_003 | 1/C/27:32, 1/C/61:66 | No text annotation | ||
| IL_6XMF_004 | 1/C/32:33, 1/C/59:61 | Single stack bend | geometric IL_4C7O_002 IL_15011.4 | |
| IL_6XMF_007 | 1/C/36:39, 1/C/52:56 | Double sheared | geometric IL_6YML_002 IL_58355.3 | |
| IL_6XMF_006 | 1/C/40:42, 1/C/49:51 | Isolated non-canonical cWW pair | geometric IL_7VFT_002 IL_42997.6 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6XMF_005 | Double sheared with near cWW |
Valid loops
No loops found
Problematic loops
No problematic loops
Coloring options: