1QA6 Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/C/114:124 | geometric HL_5D8H_001 | NA HL_92304.3* | ||
| 1/C/142:149 | homologous HL_7RQB_030 | NA | ||
| 1/D/114:124 | geometric HL_5D8H_001 | NA HL_92304.3* | ||
| 1/D/142:149 | homologous HL_7RQB_030 | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/C/109:112, 1/C/126:129 | geometric IL_1MMS_001 | NA IL_23544.2* | ||
| 1/C/137:140, 1/C/151:152 | Major groove platform geometric IL_4V9F_044 | NA IL_80663.10* | ||
| 1/D/109:112, 1/D/126:129 | geometric IL_1MMS_001 | NA IL_23544.2* | ||
| 1/D/137:140, 1/D/151:152 | Major groove platform geometric IL_4V9F_044 | NA IL_80663.10* |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/C/105:107, 1/C/131:137, 1/C/152:154 | NA | NA | ||
| 1/D/105:107, 1/D/131:137, 1/D/152:154 | homologous J3_7RQB_006 | NA |
Problematic loops
No problematic loops
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