Motif HL_50851.1 Version HL_50851.1 of this group appears in releases 3.85 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-4 | 3-5 | 4-7 | 5-8 | 6-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8UTG_002 | 8UTG | 0.0000 | 3 | G-quadruplex fragment | B | RNA (21-mer) | G | 8 | G | 10 | G | 11 | G | 13 | G | 14 | U | 15 | G | 17 | G | 18 | U | 19 | cWW | cWH | cWH | cWH | cWH | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGGCGGUUGGU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGCGGUUGG | 1 |
Release history
| Release | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- G-quadruplex fragment (1)
- Basepair signature
- cWW-cWH-cWH-cWH-cWH-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: