2GDI Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2GDI_001 | 1/X/27:33 | No text annotation | geometric HL_7TZS_001 HL_31585.3 | |
| HL_2GDI_002 | 1/X/66:73 | Other HL | ||
| HL_2GDI_003 | 1/Y/27:33 | No text annotation | geometric HL_7TZS_001 HL_31585.3 | |
| HL_2GDI_004 | 1/Y/66:73 | T-loop related | geometric HL_7TZS_002 HL_77436.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2GDI_001 | 1/X/18:20, 1/X/45:48 | No text annotation | geometric IL_7TZS_001 IL_14688.1 | |
| IL_2GDI_009 | 1/X/18:21, 1/X/38:48 | No text annotation | geometric IL_7TZS_009 IL_44624.1 | |
| IL_2GDI_002 | 1/X/20:21, 1/X/38:45 | Stack outside cWW | geometric IL_7TZS_002 IL_38394.1 | |
| IL_2GDI_003 | 1/X/23:25, 1/X/35:36 | Minor groove platform | ||
| IL_2GDI_004 | 1/X/59:63, 1/X/76:80 | cWH basepair and non-canonical AC | ||
| IL_2GDI_005 | 1/Y/18:20, 1/Y/45:48 | No text annotation | geometric IL_7TZS_001 IL_14688.1 | |
| IL_2GDI_010 | 1/Y/18:21, 1/Y/38:48 | No text annotation | geometric IL_7TZS_009 IL_44624.1 | |
| IL_2GDI_006 | 1/Y/20:21, 1/Y/38:45 | Stack outside cWW | geometric IL_7TZS_002 IL_38394.1 | |
| IL_2GDI_007 | 1/Y/23:25, 1/Y/35:36 | Minor groove platform related | geometric IL_3K0J_002 IL_51454.2 | |
| IL_2GDI_008 | 1/Y/59:63, 1/Y/76:80 | cWH basepair and non-canonical AC | geometric IL_3D2V_003 IL_38634.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_2GDI_001 | 1/X/14:15, 1/X/51:57, 1/X/82:85 | No text annotation | geometric J3_8F4O_001 J3_04521.1 | |
| J3_2GDI_002 | 1/Y/14:15, 1/Y/51:57, 1/Y/82:85 | No text annotation | geometric J3_8F4O_001 J3_04521.1 |
Problematic loops
No problematic loops
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