4W92 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4W92_002 | 1/C/82:87 | GNRA | homologous HL_4W90_003 HL_34789.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4W92_001 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4W92_001 | 1/C/28:33, 1/C/101:106 | No text annotation | homologous IL_4W90_002 IL_74322.2 | |
| IL_4W92_003 | 1/C/58:59, 1/C/96:99 | Major groove platform; stack outside cWW | homologous IL_4W90_004 IL_74641.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4W92_002 | No text annotation | ||
| IL_4W92_004 | Isolated non-canonical cWW pair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4W92_002 | 1/C/7:11, 1/C/22:23, 1/C/111:113 | No text annotation | homologous J3_4W90_002 J3_48248.1 | |
| J3_4W92_001 | 1/C/62:67, 1/C/76:79, 1/C/90:93 | C-di-AMP riboswitch | homologous J3_4W90_001 J3_15893.3 |
Problematic loops
No problematic loops
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