Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_1M82_0011/A/10:15No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_1M82_0022/A/10:15UNCG
geometric
HL_5LYS_002
HL_34617.5
HL_1M82_0033/A/10:15No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_1M82_0044/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_0055/A/10:15UNCG
geometric
HL_3U4M_001
HL_34617.5
HL_1M82_0066/A/10:15UNCG variation
geometric
HL_2CZJ_007
NA
HL_1M82_0077/A/10:15UNCG variation
geometric
HL_2CZJ_007
NA
HL_1M82_0088/A/10:15UNCG
geometric
HL_5LYS_002
HL_34617.5
HL_1M82_0099/A/10:15UNCG
geometric
HL_3U4M_001
HL_34617.5
HL_1M82_01010/A/10:15UNCG
geometric
HL_3U4M_001
HL_34617.5
HL_1M82_01111/A/10:15No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_1M82_01212/A/10:15No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_1M82_01313/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_01414/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_01515/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_01616/A/10:15UNCG
geometric
HL_3U4M_001
HL_34617.5
HL_1M82_01717/A/10:15No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_1M82_01818/A/10:15UNCG variation
geometric
HL_2CZJ_007
NA
HL_1M82_01919/A/10:15UNCG
geometric
HL_3U4M_001
HL_34617.5
HL_1M82_02020/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_02121/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_02222/A/10:15No text annotation
geometric
HL_2IZN_001
HL_48417.5
HL_1M82_02323/A/10:15No text annotation
geometric
HL_2IZN_001
HL_48417.5
HL_1M82_02424/A/10:15UNCG
geometric
HL_6DLR_002
HL_34617.5
HL_1M82_02525/A/10:15UNCG variation
geometric
HL_2CZJ_007
NA
HL_1M82_02626/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_02727/A/10:15No text annotation
geometric
HL_5HR7_005
HL_50006.2
HL_1M82_02828/A/10:15UNCG variation
geometric
HL_2CZJ_007
NA
HL_1M82_02929/A/10:15UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_1M82_03030/A/10:15UNCG
geometric
HL_3U4M_001
HL_34617.5
HL_1M82_03131/A/10:15No text annotation
geometric
HL_5U3G_001
HL_75660.5

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_1M82_0011/A/6:8,
1/A/17:20
Major groove platform with extra cWW
geometric
IL_4V9F_003
IL_51387.2
IL_1M82_0322/A/7:8,
2/A/17:19
No text annotation
IL_1M82_0033/A/6:8,
3/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_0044/A/6:8,
4/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_0335/A/7:8,
5/A/17:19
No text annotation
IL_1M82_0066/A/6:8,
6/A/17:20
Decoding loop with one bulged A
geometric
IL_3LOA_003
IL_08770.1
IL_1M82_0077/A/6:8,
7/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_0088/A/6:8,
8/A/17:20
Decoding loop with one bulged A
geometric
IL_3LOA_003
IL_08770.1
IL_1M82_0099/A/6:8,
9/A/17:20
No text annotation
geometric
IL_8P9A_400
IL_90351.1
IL_1M82_01010/A/6:8,
10/A/17:20
Decoding loop with one bulged A
geometric
IL_3LOA_003
IL_08770.1
IL_1M82_01111/A/6:8,
11/A/17:20
Decoding loop related
geometric
IL_5Z1I_002
NA
IL_1M82_01212/A/6:8,
12/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_01313/A/6:8,
13/A/17:20
Decoding loop with one bulged A
geometric
IL_3LOA_003
IL_08770.1
IL_1M82_01414/A/6:8,
14/A/17:20
Decoding loop with one bulged A
geometric
IL_3LOA_003
IL_08770.1
IL_1M82_01515/A/6:8,
15/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_01616/A/6:8,
16/A/17:20
Minor groove platform with extra cWW
geometric
IL_7RQB_031
NA
IL_1M82_01717/A/6:8,
17/A/17:20
Major groove platform with extra cWW
geometric
IL_4V9F_028
IL_51387.2
IL_1M82_03418/A/7:8,
18/A/17:19
Minor groove platform
geometric
IL_8P9A_267
IL_51454.3
IL_1M82_01919/A/6:8,
19/A/17:20
Decoding loop related
geometric
IL_5Z1I_002
NA
IL_1M82_02020/A/6:8,
20/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_02121/A/6:8,
21/A/17:20
Decoding loop with one bulged A
geometric
IL_3LOA_003
IL_08770.1
IL_1M82_02222/A/6:8,
22/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_02323/A/7:8,
23/A/17:19
No text annotation
IL_1M82_03524/A/7:8,
24/A/17:19
No text annotation
IL_1M82_02525/A/6:8,
25/A/17:20
Minor groove platform with extra cWW
geometric
IL_7RQB_031
NA
IL_1M82_02626/A/6:8,
26/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_02727/A/6:8,
27/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_1M82_03628/A/7:8,
28/A/17:19
No text annotation
IL_1M82_02929/A/6:8,
29/A/17:20
No text annotation
geometric
IL_4V9F_053
IL_09990.4
IL_1M82_03030/A/6:8,
30/A/17:20
Decoding loop with one bulged A
geometric
IL_3LOA_003
IL_08770.1
IL_1M82_03131/A/6:8,
31/A/17:20
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3

Problematic loops

#loop idProblemSequence
IL_1M82_002Decoding loop with one bulged A
IL_1M82_005Multiple bulged bases, near cWW
IL_1M82_018No text annotation
IL_1M82_024No text annotation
IL_1M82_028No text annotation

Valid loops

No loops found

Problematic loops

No problematic loops


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