#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 91-93-64-7
1 HL_5BJO_0015BJO0.00001G-quadruplex fragmentERNA (36-MER)G9A10G12G13A14G15G16IU17C18cWWcWHcWH
2 HL_5BJO_0025BJO0.64740G-quadruplex fragmentERNA (36-MER)G20A21G22G23A24G25G26U27C28cWWcWHcWH

3D structures

Complete motif including flanking bases
SequenceCounts
GAAGGAGGC1
GAGGAGGUC1
Non-Watson-Crick part of the motif
SequenceCounts
AAGGAGG(IU)1
AGGAGGU1

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusNew id, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • G-quadruplex fragment (2)
  • Basepair signature
    cWW-F-F-cWH-cWH-F
    Heat map statistics
    Min 0.65 | Avg 0.32 | Max 0.65
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1806 s